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Integrated Genome Browser
Integrated Genome Browser 6.7.3 B12865   
... tiling array data, next-generation sequencing results, genome annotations, microarray designs, and the sequence itself. IGB is implemented using the Java programming language and should run on any computer. IGB ...
Freeware
tags: view microarray design, microarray design viewer, explore genome-scale data, visualization, view, viewer

Advanced Pathway Painter
Advanced Pathway Painter 2.29   
This freeware program visualizes pathways (KEGG, BioCarta, GenMAPP, ...). The user has the possibility to display any kind of quantitative data from gene and protein experiments directly within the pathways (colours ...
Freeware
tags: pathway, kegg, genmapp, biocarta, biology, bioinformatics, bioscience, affymetrix, microarray, experiment, analysis, analyse, ncbi, sequence, protein, gene, annotation

GENOM 2005
GENOM 2005 3.42   
Genom 2005 is a feature rich and user friendly application for analysing array-experiments (e.g. from provider Affymetrix). It includes normalisation of raw data, additional gene information official gene names, location, function ...
Demo | $1 637.00
tags: affymetrix, microarray, pathway, function prediction, probeset, kegg, genmapp, biocarta, biology, bioscience, analyse, ncbi, sequence, dna, protein


MeV 4.6.2 r2536   
... is a Java tool to help you with microarray gene expression data analysis. MeV supports 5 input formats, and provides an intuitive graphical interface for clustering, classification, statistical analysis and ...
Freeware
tags: data analyzer, microarray gene analysis, analyze data, analyzer, analysis, analyze

AltAnalyze x64
AltAnalyze x64 2.02 Beta   
... allows you to take RNASeq or relatively raw microarray data (CEL files or normalized), identify predicted alternative ... you will need are your junction read or microarray files along with some simple descriptions of the ...
Freeware
tags: analyze raw microarray data, raw microarray data analysis, view protein sequence, analyzer, analyze, analysis

GNomEx
GNomEx 5.3.2   
... by the Huntsman Cancer Institute for use by microarray and next generation sequencing core facilities and large research laboratories. KWs: Illumina, Affymetrix, Agilent, MAGE, MySQL/Flex... ...
Open Source
tags: microarray sequence, research laboratory, genomic LIMS, microarray, sequence, genome
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