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DNAssist
DNAssist 3.08   
... alignments of DNA, RNA or proteins Obtaining the molecular weight of a nucleic acid or protein Obtaining the melting temperature of an oligonucleotide Calculating the pI of a protein Calculating ...
Freeware

BEAST screenshot
BEAST 1.10.2   
... a cross-platform program for Bayesian MCMC analysis of molecular sequences. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a ...
Freeware
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