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Unipro UGENE 64-bit
Unipro UGENE 64-bit 50.0   
... BLAST+, MAFFT, T-Coffee; Assembly Browser — a shiny BAM viewer. User interface Visual and interactive genome browsing including circular plasmid view; Multiple alignment editor; Chromatograms visualization; 3D viewer ...
Freeware
tags: DNA x64, education x64, visual software x64, analyze x64, genetic x64, genome analyzer, genome analysis, sequence alignment

Unipro UGENE
Unipro UGENE 50.0   
... BLAST+, MAFFT, T-Coffee; Assembly Browser — a shiny BAM viewer. User interface Visual and interactive genome browsing including circular plasmid view; Multiple alignment editor; Chromatograms visualization; 3D viewer ...
Freeware
tags: DNA, education, visual software, analyze, genetic, genome analyzer, genome analysis, sequence alignment

Staden
Staden 2.0.0b11   
... joining and breaking contigs. * Export SAM, BAM and CRAM should now be much faster in ... menu. This uses the @RG "PL"atform heading in BAM files. The List Libraries window permits editing of ...
Open Source
tags: DNA, Gap4, Gap5, Spin, trev, ancillary tools, Staden Package

Picard screenshot
Picard 2.27.2   
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary ...
Open Source
tags: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate
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