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Zeus
Zeus 1.5   
A powerful molecular visualisation tool supporting PDB/Brookhaven, MOL, MOL2/SYBYL and XYZ file formats. It incorporates a sophisticated rendering engine that can output very high quality molecular graphics. Zeus incorporates Sequence Search/Highlighting ...
Freeware
tags: PDB, peptide, protein, dna, nucleic acid, residues, molecular, viewer, molecule, atoms, visualisation

Marvin Suite
Marvin Suite 20.20.0   
... example, one can employ MarvinSketch to create complex molecules from scratch; the program supports all types of atoms, with any valence, as well as radicals and isotopes. ...
Freeware
tags: Create molecule structure, Molecule structure checker, 3D molecule viewer, Chemistry, Molecule, Structure, Atom
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